As a first example of the effects of acid rain, we can examine a case which is not obvious - effects on non-aquatic, tree nesting birds. This study was carried out in the Netherlands. It was observed that the proportion of birds laying defective eggs rose from roughly 10% in 1983-84 to 40% by 1987-88. The defective eggs had thin and highly porous egg shells, which resulted in eggs failing to hatch because of shell breakage and desiccation. As a result, there was also a high proportion of empty nests and clutch desertion. It was also observed that these effects were limited to areas of acid rain.

Since the birds did not appear to be directly affected by the acidity, the food chain was examined (these birds are positioned at the upper part of the local food chain). The difference between areas of normal soil pH (buffered by high calcium content due to limestone and marble outcrops and bedrock) and those with acidic soil appeared to be the presence of snails. The snails depend on the soil as their calcium source as they secrete their shells. With much of the CaCO3 leached out of the soil by the acid precipitation, the snails could not survive in the area. The birds did not, at first, appear to be affected, because they continued to eat spiders and insects which, while supplying a sufficiently nutritious diet for the birds, where a poor source of calcium.